rs48440987 SNP Detail

Summary

• ID
  rs48440987
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114158583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTCTATC TGCCCACTGG
  ATGCCAACCA GAAATGCAGA GAACCTGGTA CCTGCTGACT TCATACCATT GGATGCCTTT
  GAGACTCCAA ATTAGTGCTA GGGAGCTGGA AGATCCCTGG ATTGTCTCTG AGACACTCAC
  AACCACAGCA GAGAGCAGAC ACAAAGCACA GGAGCAGCCC AGGACACACA TGCCCTGAAG
  A
  AGGCTCCTAT GATAGCTTGT TAGCCAGGAC TCGGCCTTCA GCCTTGTACT GTGGGTTATT
  TTTTGCATAG AGGGCGCTCC TGAGGAAGAA TGAGTGGATC TGGAGACAGT GGCGAATCTA
  TTTGAGAAGG ATTAGGAAGT TTCTTTCTGT TGGGCAAAAT ATGTCAGTGA AGTAAGGCTT
  ATGACTTGAA ATGATTTATC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss138771771	ENSMUSSNP4341628	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48440987					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114158583 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	1476 bp downstream
Tssr118065	transcription start site region 118065	1961 bp downstream