rs48454346 SNP Detail

Summary

• ID
  rs48454346
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:86002468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAATGAATT GAAATAGAAA ATTTTGAAAA TAATTTTCTA
  TCATGTAGCA TTTTCCCAAT AAACATCTCA AATTAGATAA AGAAATTATC ATATGAAACC
  R
  TTCTGAGTTA CTTAAATATG TTAGTCAGAA AGAAAAACAG GAACTGCAAA TTGTTGTTTG
  CATAATGTTT CCCAAATTTG ATGTCTATCA TACCATGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146850015	ENSMUSSNP2439156	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320376660	CHEV_2_86012281	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48454346					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86002468 () rs orientation: forward

Symbol	Name	Function Class
Or8u9	olfactory receptor family 8 subfamily U member 9	309 bp upstream