rs48458197 SNP Detail

Summary

• ID
  rs48458197
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:59089528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CGATGCTAGT CTCATGGAGG TTAGTTCTCC CCAGACTAGG
  CTGTTAGGGC TCATGTTCGG ATGTCTTGGC ACCACCTGCT GCTTTGTACA GCCATCTCTT
  T
  TGCATGGACT TCTGCTACCA TGGTGCTGTC AAGGGACACT CACCAAAGCC AAGCAAATGC
  TTCTGTCACG CTGCTGCATC TCCCCAATGG TAAGCAAAAT A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132229184	ENSMUSSNP1356469	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48458197					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:59089528 () rs orientation: forward

Symbol	Name	Function Class
2610507I01Rik	RIKEN cDNA 2610507I01 gene	within coordinates