rs48461287 SNP Detail

Summary

• ID
  rs48461287
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49011687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAGCACTC CCTGGGAAAC CAGCCCAGAG TCTTCAGCAA
  GTCTCAGGTT GCAACGAGTG ACTTTGCCTT GAAGAAATCC AAGATGGATG ACTCCTGCAG
  G
  GATGACATCT GAAGTTGACC TCTGGCCTAC ACTTATACAC CAATTTCCAC ACTAAATCCC
  TCTTATGCAC CCCAGCAGAC ACACAAGAAC CTTGTCCTT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145722325	ENSMUSSNP6959191	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325410134	CHEV_17_48843984	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48461287					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49011687 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr13	DNA Segment, Chr 17, Derry C. Roopenian 13	1653 bp proximal
D17Mit178	DNA segment, Chr 17, Massachusetts Institute of Technology 178	1653 bp proximal