rs48463744 SNP Detail

Summary

• ID
  rs48463744
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:110975851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACACTAT GATGGCAGAG
  CTCTGCGGTT AAAATAGAGC TCCTGTAGCC TGTTAAGCCA GACCAAAGTT CATCCTGGGA
  ACCAATGAGT TTACTCGTCA CTTACAGATG GATGGTGACC CTAAAGCAGT ACACATAGGA
  AGATCAGCAC CCAGCATGGA CAATGACTCC CTCATGGCCG TGTGCTGTAA ATATTATCTT
  G
  GGGGATTTTA CTCTACTTAG ACCATACGGT TCCCAAATAA AAGACACAAA TCTTTTAAGG
  CATTAGAGCT GGACAGGTAT CAAGCCTCTG TGTTTGTCTA TTCCCACTAT TACCTGCCAT
  GTTACACCTG GACTGTTCTC ATGGCCATGT GCGCCAACCT CATGGCAATT CTTTCTCCCC
  AAGCCCTGGA GACCTGAGGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss149056744	ENSMUSSNP600656	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48463744					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:110975851 () rs orientation: forward

Symbol	Name	Function Class
Hscb	HscB iron-sulfur cluster co-chaperone	1094 bp downstream
Rr616963	regulatory region 616963	468 bp distal
Rr616964	regulatory region 616964	within coordinates