rs48468181 SNP Detail

Summary

• ID
  rs48468181
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:83402983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCTTTAA TGAGAGTTAT
  AGTTTCTATA ATCAGCTGAA AAATGTTCTG GCAGAATTCT TTCTCTCTTA GCATTGAGTT
  TAAATATTAA ATATTCATGC TTACTCTATA ACTCCAAATT CATTCTAAAA TAATTCTTTT
  CAAATCTTAT AGGTATTGTT TGTTTTCTAC TCTTTTAATA TTTAATAAAA AATACCAACT
  S
  TGTAGCTATG TATGTTCCCA CAGCATTGTG AACCTTGTGG GTTAGCCCAA CAGATATTAC
  TGATGTTTTG CCATTATTCC TTTTATGAAG CCTGCCATCC TTGCCACACC AGAGTAACTA
  TCATGCAGGC AGGCATCACA TCGACACAAG CATATTTTCT CTATACACTC GCCATTCAGC
  AGAGGGTAGC TTCATGGTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144833238	ENSMUSSNP7020809	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48468181					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:83402983 () rs orientation: forward

Symbol	Name	Function Class
Gm37989	predicted gene, 37989	1334 bp downstream
Gm69621	predicted gene, 69621	998 bp downstream