rs48476751 SNP Detail

Summary

• ID
  rs48476751
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125569493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTGTGTA TTTGGCAGCT
  CAGTGTAGGA AAAGGACCCT CAGCTGGACT GGCTTAGTGA CTGACCTGTA ATCCCAGCTA
  CATAGGAGAC TGGGGTAGCA GGATACAAGC TCAAGCAAAG CCTGGACTAG AGTGAGTTCA
  AAGCTAATAA TAACTTAAGA GAAGGAGATA GGTGATGCTT GCCTAGCATG CATGAGGCCA
  W
  GGGTTTCGTC CCTAGTACCA TTGGTGGGGG TAGAAAAGCC ATTAATGTGA GAGCGGGCTC
  TTCAGTAAGC TGTGCCATTT TCTTATCTAT AAGATGGGCA CCATAGGGCT GGGGCAGGCT
  CATATTCCTC CAGACCAGGT TCTAAAGTTA GTGCTTCACA ACTCTACCTG TGAACAATGT
  TATGGTGCCT TGTCTAAGCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320497847	CHEV_2_125553309	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs48476751					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125569493 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr70	DNA Segment, Chr 2, Derry C. Roopenian 70	1838 bp distal
D2Mit398	DNA segment, Chr 2, Massachusetts Institute of Technology 398	1835 bp distal