rs48479341 SNP Detail

Summary

• ID
  rs48479341
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34516202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCAGATA CACATCAGCT
  GATCCTCACC ACCCTCATGT CTCCAGGTCC ACCTCTCTTC ATAGTGCACA GACCATTCTG
  CATTGCTTTT TCTCCCATCT CTTCTTTACA CACTTGCTCA TTGTAGTGAG GCCTGTCTGC
  TTGTGTGTCT TGTGACATTG GGTGGGCCTC TGGTGTCTTC CACCTGCCTG TGTCTCTCTC
  Y
  AACACAATTT TTCTAGGCCC TGAAAAAAAA TACTCAACTT TATATGGAAA AACAACAACA
  ACAAAAATCC AGGATAGCTA AACCTATCCT ATACAACAAA ACAACTTCTG GAGGTACCAG
  CATTTCTGAT TTCAAAACAA CATGGTATTG GCACAGAAAC AGATAGGTTG ATTAATGGAC
  TCAAGTTGAA GAACCAGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139276056	ENSMUSSNP7055347	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48479341					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34516202 () rs orientation: forward

Symbol	Name	Function Class
Rr389464	regulatory region 389464	within coordinates