rs48485868 SNP Detail

Summary

• ID
  rs48485868
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59655535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCA GTTCCCTCCT TCCATCTACC
  K
  CCAATGACTA TTCAGTTTCC CCCTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
ss146581110	ENSMUSSNP3482597	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
ss325876321	CHEV_19_59743006	CHEVERUD	SCREENING_POP	f	SNP			G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
rs48485868					SNP	G	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59655535 () rs orientation: forward

Symbol	Name	Function Class
D19Mit76	DNA segment, Chr 19, Massachusetts Institute of Technology 76	1878 bp distal
D19Mit92	DNA segment, Chr 19, Massachusetts Institute of Technology 92	1878 bp distal
Gm19956	predicted gene, 19956	within coordinates