rs48506242 SNP Detail

Summary

• ID
  rs48506242
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:36650001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGTAATT CATGTTGTAG
  GGGATCTGAT GCCCCCTCTG GCCTCCACCA GCAGTGCATG CACATGGTAC ACAGACCCAC
  AAGCAGGCAA AACACATACA CATAAATAAA AAAATGTTTA AAAACTCAAA AAATTAAAAG
  AAAAGTTCTT AAAACGTAGT TAAACGTGAA GGCTACGAGG TAGGAACAAT TATTTTAAAA
  R
  TCATTTAAAG ATTAGTACCC AGGGCTGAAA AGATGGTTAA GGGTACAAAC TGCTCTTGAA
  GAGGACCCAG GTTTAGTTCC TAGCACCCAT GTTCAGTGGT CCAGAGCCGC GTGAAACCCC
  AGTTCCAAGG AATGCAGTGC CTCTGGCCTC CTGGGCACAT GTACACTTAT TTTTTTTAAC
  AATTCTTAAG AAATGAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148859562	ENSMUSSNP6704479	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48506242					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:36650001 () rs orientation: forward

Symbol	Name	Function Class
Gm72473	predicted gene, 72473	1004 bp upstream
Rr170674	regulatory region 170674	402 bp distal