rs48507017 SNP Detail

Summary

• ID
  rs48507017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111256204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAG CTAAGTACTT CTCAGGCATG
  R
  TGGCCCTGTG AGGCAGTTCC ATGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136966979	ENSMUSSNP3455684	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48507017					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111256204 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	997 bp proximal
Rr198795	regulatory region 198795	1397 bp proximal
Rr202627	regulatory region 202627	1667 bp distal
Rr202628	regulatory region 202628	811 bp proximal
Rr202629	regulatory region 202629	1161 bp proximal