rs48509932 SNP Detail

Summary

• ID
  rs48509932
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118009769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG GCAGCCTCTG GGTGTCTGAA
  R
  CTTTCAGAAC ATTTCATCAG AGTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss149158645	ENSMUSSNP2375237	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A		A
ss321660968	CHEV_5_118321713	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs48509932					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118009769 () rs orientation: forward

Symbol	Name	Function Class
Gm30360	predicted gene, 30360	within coordinates
Gm37028	predicted gene, 37028	1109 bp upstream
Nos1	nitric oxide synthase 1, neuronal	within coordinates