rs48510879 SNP Detail

Summary

• ID
  rs48510879
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:93733346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTT ACAGACAATT GTGAGCCTCA
  T
  GATATGGGGC CTTGGAACCA ATCCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147372069	ENSMUSSNP4248554	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323405840	CHEV_10_93360229	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs48510879					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:93733346 () rs orientation: forward

Symbol	Name	Function Class
4930471D02Rik	RIKEN cDNA 4930471D02 gene	within coordinates
Metap2	methionine aminopeptidase 2	394 bp upstream
Rr437346	regulatory region 437346	573 bp distal
Rr437347	regulatory region 437347	39 bp distal
Rr437348	regulatory region 437348	1849 bp proximal
Tssr95291	transcription start site region 95291	323 bp downstream
Tssr95292	transcription start site region 95292	309 bp downstream