rs48518575 SNP Detail

Summary

• ID
  rs48518575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTCTCTT TTTGGGAGTC
  ACAATTTAGC CCACAGGAGA AAGACGCATT GGTTACTTTT TTTTTTTTTT AAATCACCCT
  TACAAGGAGG GAAATTTTAT TTGGCTCGTG GTTCATTGAG GGGAAGGCAT GATGGCTGGG
  ACAGTCTTGG TCTAGAGCTA GGGGACTTGG TAGCATGATT TCCTTGCATC TCGGCAGCCG
  R
  CAGGGAAGTA GAGAGCTCAG GCTGGAAGCA GAGTTAGCTC ACAAACCTCA GTAGTCACTT
  AGTCTGCTAG CTGTGCCCAG GTCCAAGATA TTCACAGCCT TCAAAAACAG TGCCAACGGA
  TTCGGTAATC AAACACACAT GTGGGAGACG TTTCAGGGAC TGAGGGCACA CAGGGATGAT
  GTCGGGGGAG ATGGTATGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582082	ENSMUSSNP2879480	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48518575					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151566 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1146 bp upstream
Rr464869	regulatory region 464869	656 bp proximal
Rr464870	regulatory region 464870	1157 bp proximal