rs48525375 SNP Detail

Summary

• ID
  rs48525375
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93224750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTCAGGG AGCAGGAGCT
  GATGCAGAGG CCATGGAGGG ATGTTCTTTA CTGGCTTGCT TGCCCTGGCT TGCTCAGCCT
  GCTCTCTCAT AGAACCAAGA CTCCCAGCCC AGAGATGGTC ACACCCACAA GGGACCTTTT
  CCCCTTGATC ACTAATTGAG AAAATGCCTT ACAGTTGTAT CTCATGGAGG CATTTCCTCA
  G
  CTGAAGCTCC TTTCTCTGTG ATAACTCCAG CTGTGTCAAG TTGACACAAA ACTAGCCAGT
  ACAGTGCTTG TGCTTGGTCC ACTTTATAGA ACTCAGGACC CCCTGCCTCA GTAATGCTTG
  CACTCAGAGT GGGATGGGTC TTCCCACTTT ATTTAACTTA ATTAAGACAA TCCCCCATAG
  ACCAACTCAG TGTAGATAAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148843981	ENSMUSSNP4579196	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48525375					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93224750 () rs orientation: forward

Symbol	Name	Function Class
Gm71590	predicted gene, 71590	283 bp downstream