rs48530429 SNP Detail

Summary

• ID
  rs48530429
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132763650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCTGGTCT TGCACTCCTG
  AGCTATATGA GGAGACACAT TTTCATGGAA AGAGATTCAG ACTCTGTCAC TGTCAAACCT
  GTATGTTTGC TCCAACGTTA GTGTGTGGGG AGTGGGGTGG GAGAGAGTTA AGAAAAACAC
  ATATTTTGAG AATCATATCA GAAATTGTCA AATATTGTCT AAACATCATT TTAAAAAATT
  W
  TATCTCAAAT GGATCTGTGC GCAAATCTTT ATAACTAATA TGTAAAATGC AGCATCTTTT
  AAAGATAATA TTTGCTATCT CCCACAGCAC TCTTGCAATG ATTTTCATCA TGGAATTAGT
  AACTGAAATT ATAGGAAATG GTTTGATGGC CCTGGTGCAC TATATGGACT GGGTAAGGAA
  AAAGAAAATG CCATTAGTTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133739995	ENSMUSSNP3275324	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321968784	CHEV_6_132736705	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48530429					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132763650 () rs orientation: forward

Symbol	Name	Function Class
Tas2r145-ps3	taste receptor, type 2, member 145, pseudogene 3	47 bp upstream