rs48541441 SNP Detail

Summary

• ID
  rs48541441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140545207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTA GCCCCAGCCA TCTATGTAAC
  R
  ACCCTGGCAT AATGCAGAAG GGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147714093	ENSMUSSNP4287096	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48541441					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140545207 () rs orientation: forward

Symbol	Name	Function Class
Gm13032	predicted gene 13032	385 bp downstream
Padi1	peptidyl arginine deiminase, type I	Intron
Rr603557	regulatory region 603557	802 bp distal
Rr603558	regulatory region 603558	300 bp distal