rs48555016 SNP Detail

Summary

• ID
  rs48555016
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145290464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTGCTGGGAA TAAAGGCATG AGCCACCACA CCCAGCTTTT
  TTTTTTCTTT TGGCATTTCT AAGCACCCAT TGAACTCAAT TTTAATATTT TATAGTGTCC
  G
  CATTTCCTTC AGGCATCTGG TGTTATTTTC TTGCCCATGA TTCATTTTGT TCCTGTCTGA
  GTGGATTTAC ATGTTTAAAA ACTTTAATCT CCTTGGTCAT T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147866196	ENSMUSSNP4131949	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48555016					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145290464 () rs orientation: forward

Symbol	Name	Function Class
Gm70447	predicted gene, 70447	711 bp upstream
Rr97125	regulatory region 97125	565 bp proximal
Tssr40222	transcription start site region 40222	720 bp upstream