rs48557246 SNP Detail

Summary

• ID
  rs48557246
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:161566651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCACAGTT TTTAAAGATT
  TATATTTTAT TTCTGTGTTT GTCTACGTGT ACACAGTCAT GGATTTCCTG AAGCTGGAAT
  TACAGGTATT TATGAGCGAC TTGACACGGG TGTTGGAACT GAACTGGAAG AGTAGCAGGC
  ACTATTCACC ACTGAGCCAT CTCCTTACCG TACAGATTTA TTTTTATTAG TGTTTAGGGG
  G
  GGGGGCAGAT CACCTTGAAT TACAGACTGT TGTGAGCCAC TCAACATGGG TACCTCTGCA
  ACAGCAAGCA GTGTGCTGAT CCAGAGCATG CATTCTTGGC TACCATACAT TAGGTACTTT
  TCAGCAGCAC TTTTAATAAT ACTCCATTGT AGTCTGACTG TGTACCTGTA GCTGGGAAGA
  CTGAGGATTG AGGCAAGAGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134521538	ENSMUSSNP4345990	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48557246					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:161566651 () rs orientation: forward

Symbol	Name	Function Class
Txlng	taxilin gamma	within coordinates