rs48566181 SNP Detail

Summary

• ID
  rs48566181
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30451609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GACAAGTTAG GTCATGAAAC CCACCATGCT TTTGGTCAGG
  GTGGGAATGT GGCAGACAAG TTAGGTCATG GAGGGAATGT GGCAGACAAG CTAGGTCATG
  G
  AACCCACCAT GCTTTTGGTC AGGGTGGGAA TGTGGCAGAC AAGTTAGGTC ATGAAACCCA
  CCATGCTTTT GGTCAGGGTG GGAATGTGGC AGACAAGTTA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148687402	ENSMUSSNP3521981	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48566181					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30451609 () rs orientation: forward

Symbol	Name	Function Class
Sbsn	suprabasin	within coordinates
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	641 bp downstream
Tssr71856	transcription start site region 71856	within coordinates