rs48607208 SNP Detail

Summary

• ID
  rs48607208
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:155468175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC CAGGCTCCCC GGCTCTGAAG
  R
  GCTGCTAGGA AGACTATGGA GATAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148056273	ENSMUSSNP2571106	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320574592	CHEV_2_155451991	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48607208					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:155468175 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Myh7b	myosin, heavy chain 7B, cardiac muscle, beta			Intron
				Noncoding-Transcript-Variant
Rr568084	regulatory region 568084			1109 bp distal
Rr568085	regulatory region 568085			1370 bp distal
Rr568086	regulatory region 568086			952 bp proximal