rs48607915 SNP Detail

Summary

• ID
  rs48607915
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170795451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTTTCT GCCACATTCA
  GCTGCCCGTG CCCTTGAACT CTCTTGCTCA ACCAGGACTA CCACAACAAA CTGTTCACAC
  AGTTTCTCAG GAATTTGTGT GCCCTCCACT GCAGGCTGAG CACAAGGGCT GGCAAAAGCG
  GAAACGGGTG GACAAAAGGC CCTTGAAGCA GCTCCCTGGG ATGCTTCCCA GAAACCAGCC
  C
  ACCCCATTTC CTGCAAACTT TGCAGTAAGC AGATCCACCC CACTCCACCC CCAACTTCTT
  GGTATCCCAT CTCCTCCCAG GGCCAGCCTT TACTAACCAG AAATCACTCC CAGATCTACA
  GGGTCGCTGA GGCGGGTCTG CTCCATTTGA CACCGATATT CTCCACTGTC ATTGACTGTG
  GCCTTAAACG TGTAGCTGGC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146149186	ENSMUSSNP6776251	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48607915					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170795451 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	1981 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr372438	regulatory region 372438	within coordinates
Tssr14957	transcription start site region 14957	1359 bp upstream
Tssr14958	transcription start site region 14958	322 bp downstream