rs48611072 SNP Detail

Summary

• ID
  rs48611072
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:118894199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG ATTGGCCCAG TTCTGTATAA
  Y
  GAAAGCATTT GAGAGATGGA GGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145455093	ENSMUSSNP3842304	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss324552149	CHEV_13_119546470	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48611072					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:118894199 () rs orientation: forward

Symbol	Name	Function Class
Fgf10	fibroblast growth factor 10	within coordinates
Rr366762	regulatory region 366762	1284 bp upstream