rs48612353 SNP Detail

Summary

• ID
  rs48612353
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:73951016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGC CCCTCTCTAC AAGTGCATGT
  R
  AGCACTAAAG ACCGAGAGGC ACTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147453937	ENSMUSSNP1666491	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48612353					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:73951016 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10208	CpG island 10208	1924 bp distal
Gm58443	predicted gene, 58443	within coordinates
Gm58445	predicted gene, 58445	1439 bp upstream
Rr353118	regulatory region 353118	1215 bp distal
Tssr153889	transcription start site region 153889	1402 bp upstream