rs48621545 SNP Detail

Summary

• ID
  rs48621545
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:107455727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATCTAGATA TAAATGTATT CAGATATCTA GATATCACTG
  GATAACTAGT ATCAAGATAG CAAAATAAGC AGCATAAACT ACCAGAACAA GCCTCTCCCT
  A
  AACAGGGATG CATCCCTAGT TAGCCTGCTG AGCTGTTGTC AGTCAATGTC AGTGGTCTGT
  CTATCTGGAG CCTCTGTCTG ATGCATTCAG CTAAAAATA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145102808	ENSMUSSNP5107759	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48621545					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:107455727 () rs orientation: forward

Symbol	Name	Function Class
Gm70772	predicted gene, 70772	1185 bp upstream
Serpinb10	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10	1030 bp upstream
Tssr8339	transcription start site region 8339	1006 bp upstream
Tssr8340	transcription start site region 8340	1021 bp upstream