rs48626356 SNP Detail

Summary

• ID
  rs48626356
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53934820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTAAAAGAGA GGACTGTGTA GAGGGAGGAG TGTAGCTCAG
  TTGGTGGAGT GCAGGCCCAA CATGAACAAA ACCTTTGGTT CAAACCCCAG CATGGAGCAA
  R
  TCGGGTGTGG TAGCACATAC CAGAATGATA GGTCTTGGGA AATGGAAGCA GGAGGGAGCA
  CCAGAAATTC AGGCTTATCT TTGGCTAAAT ACTAATTGTG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147113948	ENSMUSSNP499714	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48626356					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53934820 () rs orientation: forward

Symbol	Name	Function Class
Man1a	mannosidase 1, alpha	within coordinates
Rr215194	regulatory region 215194	781 bp proximal
Rr222944	regulatory region 222944	1385 bp distal
Rr227916	regulatory region 227916	within coordinates