rs48629803 SNP Detail

Summary

• ID
  rs48629803
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:106094212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAGTGATG CAAAACAGAT
  AATGGAGGCT TCGCAGTCCA GTTTTCAGTT AGTGTGTAAG TAGGCACAAT GAAATCTCAT
  CATTTAATAC CTACTGCTAC GGAGGACAGG CATTCCCAGA TTCATCACAA AGTCACCAAG
  GCTGACTGGC ACACGAGTCG TTGTACTCTC AAAACCTTTC CACTCTCTGA GATGTTAAAG
  R
  CTAGTCATAA CTAATGGACT CTTGTCATGT TTCCCTCTGT TCCTTCTATA GCACACATTG
  GAGTATAGAT AAGAGCATGC AAGGGAAGAA AACATACATA CATACATACA TACATACATA
  CACATACACA CACAAAATAT TTTGTTAATA TATGAGATCT TGTGATTTTT ACATATGTTT
  GAAATATAAG TCTTTCTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146767806	ENSMUSSNP6185423	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48629803					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:106094212 () rs orientation: forward

Symbol	Name	Function Class
Gm48970	predicted gene, 48970	within coordinates
Gm63380	predicted gene, 63380	859 bp downstream
Rr390111	regulatory region 390111	1438 bp upstream