rs48638995 SNP Detail

Summary

• ID
  rs48638995
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118688130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGCCTGTG TGTGTATATG
  TCCAATGATC TCTTTAAACC TGAAAGCTGC CCGAAGTTCT TTTCAATGGA CGAGTAAGTG
  GGATTTCACT CAAAGGCTTC AACAAGTCTT CAGCAAAGTC TAGTGTTCAG CCGCACTTCA
  CACTTGAACC AAGCACAGTC ATCTTCGATT CTCTCTGAAC AAACGGGGTA TCTCAGTCGA
  M
  GTTGATTCCA GGAAGCAAAC TCGAAATACC TGCAGCTACT TCTGATGCAC CAACACCTGC
  TACTTCTATT TTCATACTCT GCATCCCCAT CCATCTTCAT CAGATACCCC CCACCCCCAG
  CCCTGCCCAG CCCAGCCCAG CCCAGCCCAG CCCAGCCCAA CCCAGCCCAG CCCAGCCCCC
  ACCCCGCCCG TGCCATTTCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61322055	NES16929581	PERLEGEN	MM_PANEL2	f	SNP	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48638995					SNP	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322055	NES16929581	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118688130 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	656 bp downstream
Rr226050	regulatory region 226050	471 bp proximal
Rr226051	regulatory region 226051	1472 bp proximal