rs48640201 SNP Detail

Summary

• ID
  rs48640201
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:157171264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATTTCTC ACAGCAGAAT
  AACCTGAAAT TACTGGAATG TATTCCCTAA TATGTAATCC TGATTTAAAT ATAGTGTTCC
  ATTGTTTCCC ATAAGTTTAT TAAAAATTTA AGCCTACTCA GGTCCTTCCC TCCTATAAAA
  ATAATTTTCC TAATTCCTGG TTCTGACTCA GTCTGACTGT AACTATCAGC TTTCTGCCAG
  R
  GATCAGCTTC TCTGTGGGAA CTCAAGCTGT GCACATACCT AAGCAGTGAT GCAAGATCTG
  GACCTTCCCA GAAGCAGTGT CAACCACTGA CAGAGGCCTC CAGACTTCAG TACTCTTTTC
  CTCTCTAACC CATCTCTAGA AGATGGGAAA CAAAGGGAAC AGATGCACAA CCTCACAGGG
  CAAGTTCCTA AGATTATACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145819216	ENSMUSSNP2212317	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48640201					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157171264 () rs orientation: forward

Symbol	Name	Function Class
Rasal2	RAS protein activator like 2	Intron
Rr421371	regulatory region 421371	1024 bp distal
Rr421372	regulatory region 421372	within coordinates