rs48645853 SNP Detail

Summary

• ID
  rs48645853
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101198808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGGGCTCT CGGCATGATG TTATTGTGCA CTGTGTAAAG
  ATTATCCTTG AATGATTCAA ATGCTGATTT CTGTGCCTCC ATCTGGTTGC CAGGTGCACA
  Y
  GACACTGCAG TGCTTGAGAA TGTCCTGTCT CAACGGTGTG TAAACATCGC TCCCCAGTTA
  TCTCTGATCA GTGAGTAAAA AGCTGATTAC CAATGAGGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132726825	ENSMUSSNP3207419	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48645853					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101198808 () rs orientation: forward

Symbol	Name	Function Class
Gm11617	predicted gene 11617	602 bp downstream