rs48647124 SNP Detail

Summary

• ID
  rs48647124
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97553916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTT CCTGAGAACC CAAGAGTTCT
  C
  AGCAAGAGAA GAGAAATAGC TGGCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145035342	ENSMUSSNP3011565	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss324496792	CHEV_13_98187363	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48647124					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97553916 () rs orientation: forward

Symbol	Name	Function Class
Rr274314	regulatory region 274314	1116 bp distal
Rr277788	regulatory region 277788	within coordinates
Rr285518	regulatory region 285518	1117 bp distal
Rr286473	regulatory region 286473	1645 bp proximal