rs48652787 SNP Detail

Summary

• ID
  rs48652787
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122799062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTTTTGCC TGTACATAGG TCTGTGTCCA GTATTGGATC
  TCCTGGAACT GGAGTTACAG ACAGTTAGTT GTGAGCTGCC ATGTAGGTGC TGGGAATTGA
  W
  CATGGGTCCT TTGGAAGAGC AGCCAGTGCT TTTTATATCT GGGCCATCTC CCCAGCCCTC
  TCAGAGGCTT CTTAACGAAA TTAAAATGGG AAGAAATTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135754559	ENSMUSSNP6879986	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48652787					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122799062 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	793 bp downstream