rs48652843 SNP Detail

Summary

• ID
  rs48652843
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85532658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACTGTTACC CTGACAGGGT CATCTCTGGA CACACAGAGC
  CTGCCTCTCT GCATCCCAGG ACTACCCCAT CTTAGCAGAA TAGCATTTGC ATGAGCTTCC
  R
  CATCCTCACT GGTTACAGAG TTCTGACTCA TGCTCTCTGG GAGGGTCAAG ATGATATTTG
  CATCTCCTTG CTAAGTTCCC CCAAAAGTAC CCACCAATC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148269239	ENSMUSSNP3645633	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48652843					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85532658 () rs orientation: forward

Symbol	Name	Function Class
D130051D11Rik	RIKEN cDNA D130051D11 gene	within coordinates
Gm62280	predicted gene, 62280	within coordinates
Lncppara	long noncoding RNA near Ppara	within coordinates
Rr507253	regulatory region 507253	1506 bp distal