rs48663317 SNP Detail

Summary

• ID
  rs48663317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101315482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGTCCAATT AAATATATGA ATGAGAACAA TCCATAAGAG
  CTGGGTATGA CCCTTAATCC CAGGAGGCCG AGGCAGGTGG GTCTCTTGAG TTCCAGGACA
  R
  CCAGGGATAT AAAATGAGAT CTTATCCAAG AAAACTAAAA CAAGTACACA CAACAAACAA
  CCACCATTAA TAATAATAAT AATAATAATA ATAATAATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145557446	ENSMUSSNP2187331	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48663317					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101315482 () rs orientation: forward

Symbol	Name	Function Class
Clpb	ClpB caseinolytic peptidase B	within coordinates
Rr381220	regulatory region 381220	554 bp upstream
Rr652446	regulatory region 652446	231 bp proximal
Rr652447	regulatory region 652447	486 bp proximal