rs48668288 SNP Detail

Summary

• ID
  rs48668288
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:71962659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTATCCCAT GCCTGCTTAG ACAGAACCAT
  AGACCCGTCA CCCTTGAATT CTTGAGTGGA ATGCTTATTG TACTTAACAG GCTAACTACG
  TTTCAAATCT TCTACATGGC ACTGACTTTT TCCCTACCAT GCACAAATTA CAGCTAGATG
  K
  GCAACAGTAA AATCTTTTGC CATAATGGAT TTTATTATGT TTATGCAAAA TTTTGCTAGC
  TATATTAAGT CTGTCTTAGT CTATTATCCA TGCTATGTCT TTGATGGAAA CGAAATGCCT
  TATTATCATA TAGTTCTACA TTAGTTCTCC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss144647982	ENSMUSSNP1182194	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss319787559	CHEV_1_71970074	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48668288					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:71962659 () rs orientation: forward

Symbol	Name	Function Class
Gm70455	predicted gene, 70455	1074 bp downstream