rs48672695 SNP Detail

Summary

• ID
  rs48672695
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121613541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTACCTTTC CAAACCTCCC
  ACCCCAGGAA CTGAGGGAAC ACGCCAGTCA CTTCCTCCCT GGAGGTTTTA TTCTTTCTGC
  CTTAGATTAC CAGACAGTCT TTGCCCTGTT TCCCACTCAG TGCACTCTAA AAGATAAAAC
  TCTCCTTTCC AGACTCTGGT AGGATCTGAA ACTTCAATTT GTATTTGAGT TTTGACACAG
  S
  TAGCGAAGCT CTCCCCCTCA ACGAAGGCAA TGCTGTATAG AGCCTGTTCT CCAAATTGGA
  GAAAAGGGAA GAAGAAAATG TCTAATTTGA TATCTCAAGA AGTTATCTTG TGAGTCACCC
  ATTGAGGACA CACCTACAAG TAAATAAAAT GGCCCTGCCC TCTCATGATT AGCAATGTGA
  ACAAAGACAC AGTCAAAAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135729747	ENSMUSSNP3455480	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48672695					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121613541 () rs orientation: forward

Symbol	Name	Function Class
Rr584177	regulatory region 584177	within coordinates
Rr584178	regulatory region 584178	1843 bp proximal