rs48672766 SNP Detail

Summary

• ID
  rs48672766
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34079462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTAT
  ACATACATAC TCTCATGGCT GCAAAAATGA CCATGAAACT AAGGTCCCTG GAACTCAAGT
  AAGTCCAGTC CTCCCTACTT TCCTCACTCA AGACAAAGTT CCAGAGTATT CCTTCCACTT
  GGGGTGTTAG GCTGGGAAAG GAGTGTACTG ATGGGGGGTG CTTCAAAATG CATGGAGATA
  S
  TTTTGGAACC ATCAAAGGCC CTGTTTCCAT TGAGAGTGCA TGTGACCCCT ACTCTCATAA
  GGGTCCTCTC TTGCTATTCC CCTGCCAGCT TTAGAATGGC CTCTGGACCC CTCCCTATAA
  ACCCTTCGTT GTTCTCAGCT TGGCTCTCCT CTCTGAAGCT CACTAGCCCC AACAGACCCT
  TGTCAAAAGT CAGCCCACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139269659	ENSMUSSNP7232608	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48672766					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34079462 () rs orientation: forward

Symbol	Name	Function Class
D14Mit45	DNA segment, Chr 14, Massachusetts Institute of Technology 45	158 bp distal
Tssr128062	transcription start site region 128062	750 bp downstream
Tssr128063	transcription start site region 128063	1541 bp downstream