rs48678760 SNP Detail

Summary

• ID
  rs48678760
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36737619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAACTTATGT AGATATTAGA AATAAATACA TTGATTTTCT
  ATTCATTTAA TGAGATTTTG TGATTCAGTG TTTTATTTCA TTTCATTTGC CTCCATTGTC
  A
  TTCTTTTTTT TTTTTAAAGA TTTATTTATT TATTATATGT AAGTACATTG TAGCTGTCTT
  CAGACACTCC AGAAGAGGGA GTCAGATCTT GTTAAGGAT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146949584	ENSMUSSNP5579500	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48678760					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36737619 () rs orientation: forward

Symbol	Name	Function Class
Ankhd1	ankyrin repeat and KH domain containing 1	within coordinates
Gm56496	predicted gene, 56496	within coordinates
Rr393542	regulatory region 393542	648 bp downstream
Tssr5282	transcription start site region 5282	1623 bp upstream
Tssr150641	transcription start site region 150641	1607 bp upstream
Tssr152942	transcription start site region 152942	1525 bp downstream