rs48686972 SNP Detail

Summary

• ID
  rs48686972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114480841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACCCTCA GTCCCTACAT
  GGCATACCCT GCTGGCTGCT CTTCCTCCAG AGCCTCCTTC CTATATAATG CAGACATTTT
  GCTTGCTCGT GTTCTCTCTC CCTTTCCCTC TCTCTGCTCA CTGCAAGGTC TCTTTCTCTC
  CACCCACCAT GGTGACTTCC CTGGCCTTCT CCTCTGGGGC CAGTGAACTC TCTGCCAGAG
  M
  ACAGCTTCCC AATAAACCAG CCTTTAATAT AATCTAATCT GGCTTAAAGT GGCTCATCTC
  ACTAGAAGCA TGAGTGGCAT GTGACAACAT GCAGTGAGCA CTTTGAACAA AGGGATGATG
  ACAGCCATCA GAGTTTTCAG AAAACTAATC TACGAATGCC ACCTGCTCAA GCTCACTCTG
  TAGCACTTTC AGTAAGAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145304637	ENSMUSSNP6378659	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48686972					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114480841 () rs orientation: forward

Symbol	Name	Function Class
Ndufs4	NADH:ubiquinone oxidoreductase core subunit S4	within coordinates
Rr275010	regulatory region 275010	1160 bp proximal
Rr282460	regulatory region 282460	within coordinates