rs48689096 SNP Detail

Summary

• ID
  rs48689096
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:96536946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATAAATATT CAATGTGAAA AAATAAGTGG GTGAGAAGGG
  TTAAGTGATA AAGTGTTGTT AGCTGCAAAA CTAACTTTTA TTCACCTGAG GGAAGTGTCA
  A
  GTGGAGGTTT AGTGCTGGAT AATCACACCC TTTTTAGTTC TTTCTTACTC TAGCTGGTTG
  GTTCAACTCA GCTGTTCTGG CCTAAACTCC TCTCCAAGT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss133411726	ENSMUSSNP4567311	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48689096					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:96536946 () rs orientation: forward

Symbol	Name	Function Class
Gm26011	predicted gene, 26011	776 bp downstream
Tafa1	TAFA chemokine like family member 1	within coordinates