rs48692627 SNP Detail

Summary

• ID
  rs48692627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32884548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACAATGC TACAGGTCTC
  AACCAGTTCT GAGTTACTCC AACCATGCAT ACACATTTGG GAGCTGAACA CGCTCTTTAG
  AATAGACACT CAAGGCTAGA AGGCATCACC GCAGCCTATG GCAGGGTAGC TACTCGGTTC
  CACGCTGGGG AGTTGTCACT GGCAGATGCT AGGGTCATGC AGCTGTGTTA GAGAGAGTGG
  R
  AAGCTCTACC CCATTCTCTG GCCCTAGATA ATTTGCATAT ACATCTATGT GTTGTTCAAT
  ATTTTTGGAT CAGTGGGAAA TAGAGCTGAA CTCCTACACT GGACCAACCA TGCCTTCAAG
  TGGGACAGCT GCTTTTCCCC TGTGGAATTC TCTGCTAGTC ACATAGATGG TTCTGGAACC
  CTCAGAAACA TGAAGCTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148850621	ENSMUSSNP231194	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48692627					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32884548 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	262 bp downstream
Tssr121998	transcription start site region 121998	1142 bp downstream