rs48697486 SNP Detail

Summary

• ID
  rs48697486
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:136097614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTAGATA CTGTCTGACA
  CTCAGGATGT CACCCCTTCA TCCTCTGTAG GATGCAGTGA GGTGGCAGAG AATATGGGAG
  CTGTAGCCAG TTGTGGTTAT CAGGTGAGTG AGCGCTGAGA AATACGCATA GCAAAAGGTA
  GGAATCCGCT GATGAAAGAC TATGGAGAGG GAAGATAGTA GGTTACAAGG GAAAGATGGG
  T
  TCGGAGAGAC TTTGGAGGTT ATTTAAGCAT GTTTGGAAGC AGCCAAAGAA AGGACGCTGG
  AAGAAAGAGT CAAGCGCAAA GTGTTGGAAA GTGTACCTAA GGCCCTCCGG CCGAGTACTG
  CTGCGCATGC GTCACCCACA GCCGCTCGTA GAATCTGGCC AGGCTCTGAG ACACAGAATC
  TGTTAGAATC TGTTAGCTAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133829357	ENSMUSSNP5148228	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs48697486					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:136097614 () rs orientation: forward

Symbol	Name	Function Class
Grin2b	glutamate receptor, ionotropic, NMDA2B (epsilon 2)	within coordinates
Tssr2039	transcription start site region 2039	283 bp downstream