rs48704486 SNP Detail

Summary

• ID
  rs48704486
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81105805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGTGGGGAAG AGGACAGATG CTGGAGTTAA AGTGCAGAGG
  GAGCTGAATG ACAGCTGGCT AGTCTCCATT CTGTGGTCGT TCCCAAGGGT TACTGAAGTC
  C
  TAAGCAGAAA GGGTGGTTAC AGTATGGAGA ACCCATCCCC TTAGGAGCAG CCCAACCCCC
  ATCTTGGCAG CATAGGCCTG ATAAATCAAA CCTAGTATTT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145158281	ENSMUSSNP1560745	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs48704486					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81105805 () rs orientation: forward

Symbol	Name	Function Class
Cpeb1	cytoplasmic polyadenylation element binding protein 1	598 bp upstream
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	within coordinates
Cpgi19352	CpG island 19352	503 bp distal
Tssr73332	transcription start site region 73332	1293 bp upstream
Tssr73333	transcription start site region 73333	660 bp upstream
Tssr73334	transcription start site region 73334	579 bp upstream
Tssr73335	transcription start site region 73335	556 bp upstream