rs48706033 SNP Detail

Summary

• ID
  rs48706033
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33875210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGGAATAG GACTTCTAAC AGCAAGTATG TCCTGAAGGC
  TGTGGTGCAA GGCCATTTTT GCTGGCTACA AGCGAGGTCT CCGGAACCAA AGAGAGCACA
  C
  GGCTCTTCTT AAAATTGAAG GCGTTTATGC CCGAGATGAA ACGGAGTTCT ACTTAGGCAA
  GAGATGTGCT TATGTGTATA AAGCAAAAAA CAATACAAT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148780100	ENSMUSSNP3409875	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48706033					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33875210 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	within coordinates
Gm12783	predicted gene 12783	973 bp upstream
Rr380644	regulatory region 380644	within coordinates