rs48711127 SNP Detail

Summary

• ID
  rs48711127
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23293432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGT GTAACGGGTG GCTCTCTCAC
  A
  CAAGAGACCT CAGAGCATCC AAATG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148843670	ENSMUSSNP207470	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322527926	CHEV_8_23913888	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48711127					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23293432 () rs orientation: forward

Symbol	Name	Function Class
Ap3m2	adaptor-related protein complex 3, mu 2 subunit	within coordinates
Cpgi20156	CpG island 20156	1891 bp proximal
D8Dcr5	DNA Segment, Chr 8, Derry C. Roopenian 5	1302 bp distal
Rr381798	regulatory region 381798	within coordinates
Rr660722	regulatory region 660722	1327 bp distal
Rr660723	regulatory region 660723	1497 bp distal
Rr660724	regulatory region 660724	1599 bp proximal
Tssr80611	transcription start site region 80611	467 bp downstream