rs48712802 SNP Detail

Summary

• ID
  rs48712802
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139534554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT AGATAGCTTT GAGACAGATA
  C
  CTATGAATTT TCTGAGTTTC AGGTA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss133918672	ENSMUSSNP2362938	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss322020309	CHEV_6_139506077	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48712802					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139534554 () rs orientation: forward

Symbol	Name	Function Class
4930404I20Rik	RIKEN cDNA 4930404I20 gene	within coordinates
Gm67453	predicted gene, 67453	160 bp upstream