rs48722713 SNP Detail

Summary

• ID
  rs48722713
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85531265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTG TAGCAAGCTC CCAGAGATCT
  S
  CCCTGGGCCA GCAAGACTAT AACCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148269170	ENSMUSSNP1195619	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325042426	CHEV_15_85477494	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48722713					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85531265 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7486	CpG island 7486	737 bp distal
D130051D11Rik	RIKEN cDNA D130051D11 gene	within coordinates
Gm62280	predicted gene, 62280	within coordinates
Lncppara	long noncoding RNA near Ppara	within coordinates
Rr507251	regulatory region 507251	1335 bp distal
Rr507252	regulatory region 507252	614 bp distal
Rr507253	regulatory region 507253	113 bp distal
Tssr132525	transcription start site region 132525	1351 bp downstream
Tssr132526	transcription start site region 132526	937 bp downstream