rs48724533 SNP Detail

Summary

• ID
  rs48724533
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86180637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCTATGAAC TCTTAAATTA GCCCTGAGAA TTTTCTTTTG
  TTGTTTTTCT AAAAGTTTTA CATTATACAT TTCAGCCTGT GGTCTGTATG AAGCTGTTTT
  T
  GGTTAGGTGT GATGCTTGTA AGCATTTTGT TTGCTTATTG ATGTCTAGTT GCTACAGCCC
  ATGTGCTGAG AACACTGTCA CCACTAAGGT GCCTTTTAC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss135445811	ENSMUSSNP6568722	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320829505	CHEV_3_86077252	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs48724533					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86180637 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	1902 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates