rs48724622 SNP Detail

Summary

• ID
  rs48724622
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143971481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGGATGGA AGGGAGAACT GTAGGCAGGA ATGTTTCTCT
  TCTGGGATTG TCTCTCAGGT GCAGATGGGT AATTCTGGCT GATGCCTGCT AATGGAGGAG
  R
  CACTGGGCAG AGAGAGCCAA ATCTGCCCAA ATTTCACCAT CTTCCAAAAT CCTACTGTTT
  CTTACTTGGA CTACTCACAG CACATGCCAA CAAGCTGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136029556	ENSMUSSNP938636	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48724622					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143971481 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	722 bp distal
Rr74712	regulatory region 74712	994 bp proximal