rs48729802 SNP Detail

Summary

• ID
  rs48729802
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:79705538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGAAAGGAC ATTTGAAGTC TTCCTACCTG AGACTAGAGG
  AACTTCGATG AAATCGACGA GTCTGTGTTT TATCTTAGTT TCCTTCAGTT TTGACGTGAG
  R
  CCTTGCCGTG TTCCCCGAGC TGCTCTGGAA CTCTCCGGCC CAAGAGGAGT AGCTGAGACA
  GCAGCTTATG TCGCATCTCC AGACAAGTCT GCAATTTAGG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss61024673	NES16101782	PERLEGEN	MM_PANEL2	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs48729802					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61024673	NES16101782	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79705538 () rs orientation: forward

Symbol	Name	Function Class
Rr649770	regulatory region 649770	within coordinates
Tssr73200	transcription start site region 73200	392 bp downstream
Zfp710	zinc finger protein 710	Intron